Compromission d’une machine virtuelle opérée par Migale
Le 13 février dernier, nous avons été alerté par Renater – via le service « Sécurité des Systèmes d’Information » (SSI) INRAE- d’une possible activité malveillante provenant d’une adr
Migale Bioinformatics Facility
We provide several services for scientists to deal with life sciences data
Our Services
Migale, one of the Collective Scientific Infrastructure of INRAE, is part of the BioinfOmics Research Infrastructure of INRAE for bioinformatics. It is also a member of IFB (Institut Français de Bioinformatique), the French bioinformatics infrastructure and associated facility of France Génomique, the French genomic infrastructure for which we contribute to support different developments in bioinformatics.
A free account gives you access to work and save directories for your data, and access to the computer farm for your analyses.
The cluster farm is composed of about a thousand cores organized in different queues. We use the Sun Grid Engine queuing system for managing jobs.
You have a free access to our Galaxy server. Galaxy allows non-bioinformaticians to easily run tools without technical knowledges.
Command line tools, R packages and Galaxy wrappers are available on request and accessible to all migale authenticated users.
We provide an access to a large set of public biological databanks including whole genomes, nucleic and proteic sequences and other resources. They are updated automatically with BioMaJ or upon request.
We write tutorials to help you get familiar with tools, best practices, languages, etc.
Each year, we offer our "Bioinformatics by practicing" cycle. This cycle covers a broad spectrum of bioinformatics. The modules mix theoretical part and practical work.
We answer to the most common questions regarding the technical difficulties you can go through on our infrastructure.
Find all the ways to contact us.
Update Bioconductor
Stable release of Bioconductor on R/RStudio is now 3.16
Bioconductor 3.16, consisting of 2183 software packages, 416 experiment data packages, 909 annotation packages, 28 workflows and 8 books.
Galaxy major update
For the beginning of this new year, Migale’s Galaxy instance has benefited from a major material and software update.
MIGALE, one of the 7 platforms engaged in the Ferments of the Future Grand Challenge
Ferments offer exceptional potential for innovation to support transitions towards safer, healthier and more sustainable food. Coordinated by INRAE and ANIA, and financed by France 2030 (€48.3 million over 10 years), the Grand défi Ferments du Futur aims to accelerate research and innovation in the field of ferments and fermented foods.
Our 2023 training session is opened !
*** English version below ***
MIGALE vient d'ouvrir son cycle 2023 de formation "Bioinformatique par la pratique" avec 16 modules dont un petit nouveau :
Enquête de satisfaction annuelle / Annual feedback survey
Bonjour/Hello
(English version below),
Comme chaque année, nous vous invitons à rempir notre enquête de staisfaction annuelle. Cette enquête est un des moyens que nous utilisons, dans le cadre de nôtre démarche qualité ISO9001, pour mesurer l’adéquation entre vos besoins et notre offre de service.
Cette enquête ne vous demandera que quelques minutes à remplir et est disponible jusqu’au 15 décembre 2022 à cette adresse :
https://migale.inrae.fr/evaluation2022
Review of our 2022 training session
*** English version below ***
Notre cycle de formation « Bioinformatique par la pratique » 2022 s’est achevé fin septembre.
Ce sont 16 modules différents qui ont été donnés, dont un qui a été joué une 2e fois, représentant 29 jours de formation sur l’année.
Nous avons formé 105 apprenants, dont 69 INRAE (65%), 33 académiques et 3 personnes du privé. Comme le montre la répartition par département des agents INRAE ci-dessous, une petite moitié appartient au département MICA.
Planned shutdown of all services from September 26th to September 29th 2022
Planned shutdown of all services from September 27th to September 29th 2022
Access to the Migale bioinformatics facility will be unavailable from Monday, September 26th to Thursday, September 29th 2022.
Expected duration of interruption
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Start: 26/09/2022 1pm
Unavailability: 26/09/2022 3pm
End (estimation) : 29/09/2021 6pm
Users affected by the incident
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Teaching material
You are already familiar with the tutorials that we provide on a dedicated website. Following the general principles of Open Science, Migale gives access to the support of the various training courses of our cycle.
All the trainings are under CC BY-SA 4.0 license.
You can find all the teaching material used for our courses on a dedicated website: https://trainings.migale.inrae.fr
[Fr] Poste d'ingénieur•e d'études en bioinformatique ouvert à la mobilité
Un poste de bioinformaticien•ne, niveau ingénieur•e d'étude, dédié à l'analyse de données (méta)-omiques microbiennes est ouvert à la campagne annuelle de mobilité sur la plateforme.
La description du poste est disponible sur le site INRAE dédié à la mobilité.