isclogotitleMigale Bioinformatics Facility

We provide several services for scientists to deal with life sciences data



Open infrastructure dedicated to life sciences data processing



Dissemination of expertise in bioinformatics



Design and development of bioinformatics applications



Data analysis

Our Services

Migale, one of the Collective Scientific Infrastructure of INRAE, is part of the BioinfOmics Research Infrastructure of INRAE for bioinformatics. It is also a member of IFB (Institut Français de Bioinformatique), the French bioinformatics infrastructure and associated facility of France Génomique, the French genomic infrastructure for which we contribute to support different developments in bioinformatics.
A free account gives you access to work and save directories for your data, and access to the computer farm for your analyses.
The cluster farm is composed of about a thousand cores organized in different queues. We use the Sun Grid Engine queuing system for managing jobs.
You have a free access to our Galaxy server. Galaxy allows non-bioinformaticians to easily run tools without technical knowledges.
Command line tools, R packages and Galaxy wrappers are available on request and accessible to all migale authenticated users.
We provide an access to a large set of public biological databanks including whole genomes, nucleic and proteic sequences and other resources. They are updated automatically with BioMaJ or upon request.
We write tutorials to help you get familiar with tools, best practices, languages, etc.
Each year, we offer our "Bioinformatics by practicing" cycle. This cycle covers a broad spectrum of bioinformatics. The modules mix theoretical part and practical work.
We answer to the most common questions regarding the technical difficulties you can go through on our infrastructure.
Find all the ways to contact us.

Review of our 2022 training session

Submitted by sschbath on
2022 training session

*** English version below ***

Notre cycle de formation « Bioinformatique par la pratique » 2022 s’est achevé fin septembre. 

Ce sont 16 modules différents qui ont été donnés, dont un qui a été joué une 2e fois, représentant 29 jours de formation sur l’année.

Nous avons formé 105 apprenants, dont 69 INRAE (65%), 33 académiques et 3 personnes du privé. Comme le montre la répartition par département des agents INRAE ci-dessous, une petite moitié appartient au département MICA.

Planned shutdown of all services from September 26th to September 29th 2022

Submitted by vloux on
work in progress sign

Planned shutdown of all services from September 27th to September 29th 2022


Access to the Migale bioinformatics facility will be unavailable from Monday, September​ 26th to Thursday, September 29th 2022.

 

Expected duration of interruption

___________________________

 

Start: 26/09/2022 1pm

Unavailability: 26/09/2022 3pm

End (estimation) : 29/09/2021 6pm

 

Users affected by the incident

________________________

 

Teaching material

Submitted by orue on
training content

You are already familiar with the tutorials that we provide on a dedicated website. Following the general principles of Open Science, Migale gives access to the support of the various training courses of our cycle.
All the trainings are under CC BY-SA 4.0 license.

You can find all the teaching material used for our courses on a dedicated website: https://trainings.migale.inrae.fr