[Update 07.02.22 : bigmem node and queue added]
[Update 16.02.22 : nodes on short, long and infinit.q queue added]
[Update 21.02.22 : highmem.q queue added]
Migale Bioinformatics Facility
We provide several services for scientists to deal with life sciences data
Our Services
Migale, one of the Collective Scientific Infrastructure of INRAE, is part of the BioinfOmics Research Infrastructure of INRAE for bioinformatics. It is also a member of IFB (Institut Français de Bioinformatique), the French bioinformatics infrastructure and associated facility of France Génomique, the French genomic infrastructure for which we contribute to support different developments in bioinformatics.
A free account gives you access to work and save directories for your data, and access to the computer farm for your analyses.
The cluster farm is composed of about a thousand cores organized in different queues. We use the Sun Grid Engine queuing system for managing jobs.
You have a free access to our Galaxy server. Galaxy allows non-bioinformaticians to easily run tools without technical knowledges.
Command line tools, R packages and Galaxy wrappers are available on request and accessible to all migale authenticated users.
We provide an access to a large set of public biological databanks including whole genomes, nucleic and proteic sequences and other resources. They are updated automatically with BioMaJ or upon request.
We write tutorials to help you get familiar with tools, best practices, languages, etc.
Each year, we offer our "Bioinformatics by practicing" cycle. This cycle covers a broad spectrum of bioinformatics. The modules mix theoretical part and practical work.
We answer to the most common questions regarding the technical difficulties you can go through on our infrastructure.
Find all the ways to contact us.
New article: Integration of Multiomic Data to Characterize the Influence of Milk Fat Composition on Cantal-Type Cheese Microbiota
This work is the result of a collaboration with the UMR 0545 of INRAE Aurillac. It can be accessed here
Évolution de l’infrastructure de calcul et stockage / Computing Infrastructure Evolution
Bonjour,
(English below)
Comme annoncé précédemment nous faisons évoluer notre infrastructure informatique en ce début d’année.
Pour les plus pressés d’entre vous, voici les éléments essentiels :
Interruption des accès en ligne de commande et de RSstudio jeudi 3 février de 8h à 10h.
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Le cluster de calcul est renouvelé de moitié avec des nœuds de calcul plus récents.