isclogotitleMigale Bioinformatics Facility

We provide several services for scientists to deal with life sciences data



Open infrastructure dedicated to life sciences data processing



Dissemination of expertise in bioinformatics



Design and development of bioinformatics applications



Data analysis

Our Services

Migale, one of the Collective Scientific Infrastructure of INRAE, is part of the BioinfOmics Research Infrastructure of INRAE for bioinformatics. It is also a member of IFB (Institut Français de Bioinformatique), the French bioinformatics infrastructure and associated facility of France Génomique, the French genomic infrastructure for which we contribute to support different developments in bioinformatics.
A free account gives you access to work and save directories for your data, and access to the computer farm for your analyses.
The cluster farm is composed of about a thousand cores organized in different queues. We use the Sun Grid Engine queuing system for managing jobs.
You have a free access to our Galaxy server. Galaxy allows non-bioinformaticians to easily run tools without technical knowledges.
Command line tools, R packages and Galaxy wrappers are available on request and accessible to all migale authenticated users.
We provide an access to a large set of public biological databanks including whole genomes, nucleic and proteic sequences and other resources. They are updated automatically with BioMaJ or upon request.
We write tutorials to help you get familiar with tools, best practices, languages, etc.
Each year, we offer our "Bioinformatics by practicing" cycle. This cycle covers a broad spectrum of bioinformatics. The modules mix theoretical part and practical work.
We answer to the most common questions regarding the technical difficulties you can go through on our infrastructure.
Find all the ways to contact us.

Planned shutdown of all services from September 23d to 26th 2024

Submitted by vloux on
work logo

Access to the Migale bioinformatics facility will be unavailable from Monday, September​ 23d to Thursday, September 26th 2024.

Expected duration of interruption
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Start: 23/09/2024 noon
Unavailability: 23/09/2024 1.30 PM
End (estimation) : 26/09/2024 6 PM

Users affected by the incident
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Fromages et laits AOP : une analyse de grande ampleur révèle leur diversité microbienne

Submitted by orue on
fromages

En France, 46 fromages bénéficient de l’AOP, qui atteste de l’origine géographique des produits. La richesse des terroirs français donne un goût unique aux fromages AOP et jouerait un rôle dans la diversité microbienne de ces derniers. C’est ce qu’a montré une équipe de chercheurs d’INRAE, du CEA, du CNAOL et du CNIEL en analysant les bactéries, les levures et les moisissures présentes dans plus de 2 000 échantillons de fromages français labellisés AOP et dans 400 laits associés.

Update R

Submitted by vmartin on

R logoR 4.4.1 is now the default version on migale

  3.19

CHANGES IN R 4.4.1

C-LEVEL FACILITIES

  • Functions R_atof and R_strtod declared in header ‘R_ext/Utils.h’ are now documented