From now on and as far as possible, we install our tools under the "conda" environment.
This allows us to avoid conflicts between the different dependencies of each tool.
We will gradually remove the "classic" "old" installations to keep only the "conda" versions. Beginning June 19th, all tools will be available only via Conda.
Help on how to use the tools under "conda" can be found here: https://migale.inra.fr/faq#migale-condalist
Get a list of all the tools that are available on migale: https://migale.inra.fr/tools
If you have scripts, It may be necessary to check them, and modify them to keep update and running.
To use the Conda environment on cluster please visit this link https://migale.inra.fr/sge